Education
Graduate Training:
Graduate training opportunities are available in DMC laboratories. Please inquire with individual investigators for openings and graduate program affiliations. DMC investigators are members of the following Duke Graduate training programs: Department of Molecular Genetics & Microbiology, University Program in Genetics and Genomics, Program in Cell and Molecular Biology, Program in Computational Biology and Bioinformatics, Program in Biomedical Engineering, and the Biology Graduate Program.
DMC investigators are also participating faculty in Integrative Bioinformatics for Investigating and Engineering Microbiomes (IBIEM), a NSF-sponsored graduate training program organized jointly between Duke University and North Carolina A&T State University.
Workshops:
Upcoming Workshops: Introduction to Microbiome Study Design and Data Analysis (GCB Academy Workshop; POSTPONED DUE TO COVID-19)
Previous Workshops:
Quantitative Methods for HIV Researchers, Spring 2020, Instructor: Josh Granek
Microbiome Analysis, Nov 2nd, 2017, Instructors: Olaf Mueller & Holly Dressman
Next-Generation Sequencing Short-Course (Department of Biostatistics and Bioinformatics), Summer 2016 & 2017, Instructor: Josh Granek
Microbiome Workshop, Jan 28th, 2016, Instructor: Olaf Mueller
Next-Generation Sequencing Short-Course (Department of Biostatistics and Bioinformatics), Summer 2015, Instructor: Josh Granek
Next Generation Sequence Analysis Workshop, Jan 2015, Instructor: Josh Granek
Duke Software Carpentry Workshop and SWC, June 2014, Instructor: Josh Granek
Next Generation Sequence Analysis Workshop, July 2013, Instructor: Josh Granek
NGS Genome Assembly Workshop, Dec 2013, Instructor: Olaf Mueller
Outside Resources:
The Ohio State University has put together a set of online education resources:
–Microbiome Informatics Webinar Series (Spring 2021)
Related Courses:
Course #: | Course Name: | Instructor: |
---|---|---|
BME 590 | Special Topics in Biomedical Engineering: Metabolic Networks & Metabolic Design |
Michael Lynch |
BIO 212L | General Microbiology | Amy Schmid |
BIO 308A/ENVIRON 308A/GBLHEALTH 308A | Oceans and Health | Dana Hunt |
BIO 311 | Systems Biology | Amy Schmid |
BIO 346 | Symbiosis: From Organelles to Microbiomes | François Lutzoni |
BIO 369LA/704LA | Biological Oceanography | Zachary Johnson |
BIO 374LA | Marine Molecular Ecology | Zachary Johnson |
BIO 380LA | Marine Molecular Biology | Dana Hunt |
BIO 522S | Origins of Cellular Life | Amy Schmid |
BIO 540L | Mycology | Rytas Vilgalys |
BIO 557L | Microbial Ecology and Evolution | Rytas Vilgalys |
BIO 723 | Statistical Computing for Biologists | Paul Magwene |
CBB 520 | Genomic Tools and Technologies | Fred Dietrich |
CBB 574 | Modeling and Engineering Genet Circuits | Lingchong You |
CBB 720 | Sequencing-Based Genomics | Tim Reddy |
CEE 462L(124L) | Biological Principles in Environmental Engineering | Marc Deshusses or Claudia Gunsch |
CEE 562(244) | Biological Processes in Environmental Engineering | Marc Deshusses |
CEE 566(250) | Environmental Microbiology | Claudia Gunsch |
CEE 661(239L)/BME 565L | Environmental Molecular Biotechnology | Claudia Gunsch |
CEE 690 | Advanced Topics in Civil and Environmental Engineering | Josh Granek |
ENVIRON/BIO 627-01 | Molecular Ecology | Jennifer Wernegreen |
ENVIRON/GENOME 750 | Genomics Microbial Diversity | Jennifer Wernegreen |
MGM 582 | Microbial Pathogenesis | Multiple Faculty |
MGM 720 | Computational Tools for Next Generation Sequencing | Fred Dietrich |
UPGEN 778 | Exploring the Microbiome | Lawrence David, John Rawls, Neil Surana |