PUBLICATIONS

* corresponding author , # equal contribution

Peskin B, Henke K, Cumplido N, Treaster S, Harris MP*, Bagnat M*, Arratia G* (2020) Notochordal signals establish phylogenetic identity of the teleost spine. Curr Biol (Link).

Levic DS, Ryan S, Marjoram L, Honeycutt J, Bagwell J, Bagnat M* (2020) Distinct roles for luminal acidification in apical protein sorting and trafficking in zebrafish. JCB (Link).

Bagwell J, Norman J, Ellis K, Peskin B, Hwang J, Ge X, Nguyen S, McMenamin SK, Stainier DYR, Bagnat M* (2020) Notochord vacuoles absorb compressive bone growth during zebrafish spine formation. eLife (Link).


Park J, Levic DS, Sumigray KD, Bagwell J, Eroglu O, Block C, Eroglu C, Barry R, Rawls JF, Watts SA, Lechler T, Bagnat M* (2019) Lysosome-rich enterocytes mediate protein absorption in the vertebrate gut. Dev Cell (PDF file).


Developmental Cell Preview: Packing in the Proteins. Michelle S. Massaquoi and Karen Guillemin (2019)(PDF file).


Norman J, Sorrell EL, Hu Y, Siripurapu V, Garcia J, Bagwell J, Charbonneau P, Lubkin SR, Bagnat M* (2018) Tissue self-organization underlies morphogenesis of the notochord. Phil. Trans. R. Soc. B. 373: 20170320 (Pubmed) (PDF file).


Wopat S, Bagwell J, Sumigray KD, Dickson AL, Huitema LFA, Poss KD, Schulte-Merker S, Bagnat M* (2018) Spine patterning is guided by segmentation of the notochord sheath. Cell Reports. (Pubmed) (PDF file).


Garcia J#, Bagwell J#, Njaine B, Norman J, Levic DS, Wopat S, Miller SE, Liu X, Locasale JW, Stainier DY, Bagnat M* (2017) Sheath cell invasion and trans-differentiation repair mechanical damage caused by loss of caveolae in the zebrafish notochord. Current Biology. 27(13):1982-1989.e3. PMCID: PMC5526084 (Pubmed) (PDF file).


Cao J, Navis A, Dickson AL, Gemberling M, Karra R, Bagnat M*, Poss KD* (2016) Single epicardial cell transcriptome sequencing identifies Caveolin 1 as an essential factor in zebrafish heart regeneration. Development. 143(2):232-43. PMCID: PMC4725347. (Pubmed) (PDF file).


Marjoram L, Alvers A, Deerhake ME, Bagwell J, Mankiewicz J, Cocchiaro J, Beerman RW, Willer J, Katsanis N, Tobin DM, Rawls JF, Goll M, Bagnat M* (2015) Epigenetic control of intestinal barrier function and inflammation in zebrafish. Proc Natl Acad Sci USA. 112:2770-75. PMCID: PMC4352795. (Pubmed) (PDF file).


Rodríguez-Fraticelli AE, Bagwell J, Bosch-Fortea M, Boncompain G, Reglero-Real N, Andrés G, Alonso MA, Millán J, Perez F, Bagnat M* and Martín-Belmonte F* (2015) Developmental regulation of apical endocytosis controls epithelial patterning in vertebrate tubular organs. Nat. Cell Bio. 17(3):241-50. PMCID: PMC5126975. (Pubmed) (PDF file).


Navis A and Bagnat M* (2015) Loss of cftr function leads to pancreatic destruction in juvenile zebrafish. Dev. Bio. 399(2):237-48. PMCID: PMC4765326. (Pubmed) (PDF file).


Alvers, A, Ryan, S, Scherz, PJ, Huisken, J, Bagnat, M* (2014) Single continuous lumen formation in the zebrafish gut is mediated by smoothened-dependent tissue remodeling. Development. 141(5):1110-9. PMCID: PMC3929411. (Pubmed) (PDF file).


Ryan S#, Willer J#, Marjoram L, Bagwell J, Mankiewicz J, Leshchiner I, Goessling W, Bagnat M*, Katsanis N* (2013) Rapid identification of zebrafish kidney cyst mutations by whole exome sequencing. Development. 140(21):4445-51. PMCID: PMC4007718. (Pubmed) (PDF file).


Navis, A., Marjoram, L, Bagnat, M* (2013) cftr controls fluid secretion and function of Kupffer’s Vesicle in zebrafish. Development. 140(8): 1703-12. PMCID: PMC3621488. (Pubmed) (PDF file).


Ellis K, Bagwell J, Bagnat M* (2013) Notochord vacuoles are lysosome-related organelles that function in axis and spine morphogenesis. J Cell Bio. 200(5): 667-79. PMCID: PMC3587825. (Pubmed) (PDF file).

In Focus: Notochord vacuoles make a rod for the vertebrate back. J Cell Biol. 200(5):553. (JCB).

SCIENCE NOW: Giant bubbles protect fish from scoliosis.

Science in the clouds: Giant bubbles protect fish from scoliosis.

Bagnat M*, Navis A, Herbstreith S, Brand-Arzamendi K, Curado S, Gabriel S, Mostov KE, Huisken J, and Stainier DY* (2010) Cse1l is a negative regulator of CFTR-dependent fluid secretion. Curr Biol. 20(20):1840-5. PMCID: PMC2963654. (Pubmed) (PDF file).

Bagnat M*, Cheung ID, Mostov KE, Stainier DY* (2007) Genetic control of single lumen formation in the zebrafish gut. Nat Cell Biol. 9(8):954-60. (Pubmed) (PDF file).

Nat Cell Biol. 9:880-881. (featured in the News and Views section of the journal: “It takes guts to make a single lumen” Heinz-Georg Belting & Markus Affolter. (Pubmed) Also featured in Nature: “Development: inflationary pressures” Nature 449: 549. (Pubmed)


Reviews and Book Chapters


Majoram L, Bagnat M* (2015) Infection, inflammation and healing in zebrafish: intestinal inflammation. Curr Pathobiol Rep. 3(2):147-53. PMCID: PMC4520400. (Pubmed).

Navis A and Bagnat M* (2015) Developing pressures: fluid forces driving organogenesis. Curr Opin Genet Dev. 32:24-30. PMCID: PMC4470832. (Pubmed).

Ellis K, Hoffman B and Bagnat M* (2013) The vacuole within: how cellular organization dictates notochord function. Bioarchitecture. 3(3):64-8. PMCID: PMC3782541. (Pubmed).

Navis A and Bagnat M* (2013) Chapter: Apical-basal polarity during lumen formation. “Cell Polarity”. Springer-Verlag (Editor: Klaus Ebnet).