R Packages

The R packages listed on this page are available via CRAN or Bioconductor.

If you have Bioconductor configured for your R environment, you may install any of these packages by using the following commands in R console:

library(BiocInstaller)
biocLite("package-name")

(this works for both CRAN and Bioconductor packages).

• coxmeg: Cox Mixed-Effects Model for Genome-Wide Association Studies
• di: Utilities to Calculate Deficit Index (DI)
• haploR: An R-package for Querying Web-Based Annotation Tools
• rqt: Utilities for Gene-Level Meta-Analysis
• stpm: An R Package for Stochastic Process Model