We’re excited to announce the deployment of a new interactive Shiny app designed to make exploring our single-cell RNA-seq datasets easier and more intuitive for all our echino-community.
It has been built using the powerful Seurat framework in R and hosted on our Shiny Server, this app provides a user-friendly interface for researchers to:
• Visualize single-cell data interactively
• Explore gene expression across clusters, time stages and cell types
• Perform basic visualization and gene searches without writing R code
Whether you’re a bioinformatician or just getting started with single-cell analysis, our app is designed to help you dive into the data and gain insights quickly.
Try it now: http://urchinatlas.biology.duke.edu:3838/
It contains two large datasets, so it takes a couple minutes to be fully loaded. So please be patient while our servers are spinning off.
We’ll continue to expand the app with new datasets and features, so stay tuned!
