X-mas Under X-ray

If, like me, you just cannot wait until Christmas morning to find out what goodies are hiding in those shiny packages under the tree, we have just the solution for you: stick them in a MicroCT scanner.

A christmas present inside a MicroCT scanner.

Our glittery package gets the X-ray treatment inside Duke’s MicroCT scanner. Credit Justin Gladman.

Micro computed-tomography (CT) scanners use X-ray beams and sophisticated visual reconstruction software to “see” into objects and create 3D images of their insides. In recent years, Duke’s MicroCT has been used to tackle some fascinating research projects, including digitizing fossils, reconstructing towers made of stars, peaking inside of 3D-printed electronic devices, and creating a gorgeous 3D reconstruction of organs and muscle tissue inside this Southeast Asian Tree Shrew.

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A 20 minute scan revealed a devilish-looking rubber duck. Credit Justin Gladman.

But when engineer Justin Gladman offered to give us a demo of the machine last week, we both agreed there was only one object we wanted a glimpse inside: a sparkly holiday gift bag.

While securing the gift atop a small, rotating pedestal inside the device, Gladman explained how the device works. Like the big CT scanners you may have encountered at a hospital or clinic, the MicroCT uses X-rays to create a picture of the density of an object at different locations. By taking a series of these scans at different angles, a computer algorithm can then reconstruct a full 3D model of the density, revealing bones inside of animals, individual circuits inside electronics – or a present inside a box.

“Our machine is built to handle a lot of different specimens, from bees to mechanical parts to computer chips, so we have a little bit of a jack-of-all-trades,” Gladman said.

Within a few moments of sticking the package in the beam, a 2D image of the object in the bag appears on the screen. It looks kind of like the Stay Puft Marshmallow Man, but wait – are those horns?

Blue devil ducky in the flesh.

Blue devil ducky in the flesh.

Gladman sets up a full 3D scan of the gift package, and after 20 minutes, the contents of our holiday loot is clear. We have a blue devil rubber ducky on our hands!

Blue ducky is a fun example, but the SMIF lab always welcomes new users, Gladman says, especially students and researchers with creative new applications for the equipment. For more information on how to use Duke’s MicroCT, contact Justin Gladman or visit the Duke SMIF lab at their website, Facebook, Youtube or Instagram pages.

Kara J. Manke, PhD

Post by Kara Manke

When Art Tackles the Invisibly Small

Huddled in a small cinderblock room in the basement of Hudson Hall, visual artist Raewyn Turner and mechatronics engineer Brian Harris watch as Duke postdoc Nick Geitner positions a glass slide under the bulky eyepiece of an optical microscope.

To the naked eye, the slide is completely clean. But after some careful adjustments of the microscope, a field of technicolor spots splashes across the viewfinder. Each point shows light scattering off one of the thousands of silver nanoparticles spread in a thin sheet across the glass.

“It’s beautiful!” Turner said. “They look like a starry sky.”

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A field of 10-nanometer diameter silver nanoparticles (blue points) and clusters of 2-4 nanoparticles (other colored points) viewed under a dark-field hyperspectral microscope. The clear orbs are cells of live chlorella vulgaris algae. Image courtesy Nick Geitner.

Turner and Harris, New Zealand natives, have traveled halfway across the globe to meet with researchers at the Center for the Environmental Implications of Nanotechnology (CEINT). Here, they are learning all they can about nanoparticles: how scientists go about detecting these unimaginably small objects, and how these tiny bits of matter interact with humans, with the environment and with each other.

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The mesocosms, tucked deep in the Duke Forest, currently lay dormant.

The team hopes the insights they gather will inform the next phases of Steep, an ongoing project with science communicator Maryse de la Giroday which uses visual imagery to explore how humans interact with and “sense” the nanoparticles that are increasingly being used in our electronics, food, medicines, and even clothing.

“The general public, including ourselves, we don’t know anything about nanoparticles. We don’t understand them, we don’t know how to sense them, we don’t know where they are,” Turner said. “What we are trying to do is see how scientists sense nanoparticles, how they take data about them and translate it into sensory data.”

Duke Professor and CEINT member Mark Wiesner, who is Geitner’s postdoctoral advisor, serves as a scientific advisor on the project.

“Imagery is a challenge when talking about something that is too small to see,” Wiesner said. “Our mesocosm work provides an opportunity to visualize how were are investigating the interactions of nanomaterials with living systems, and our microscopy work provides some useful, if not beautiful images. But Raewyn has been brilliant in finding metaphors, cultural references, and accompanying images to get points across.”

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Graduate student Amalia Turner describes how she uses the dark-field microscope to characterize gold nanoparticles in soil. From left: Amalia Turner, Nick Geitner, Raewyn Turner, and Brian Harris.

On Tuesday, Geitner led the pair on a soggy tour of the mesocosms, 30 miniature coastal ecosystems tucked into the Duke Forest where researchers are finding out where nanoparticles go when released into the environment. After that, the group retreated to the relative warmth of the laboratory to peek at the particles under a microscope.

Even at 400 times magnification, the silver nanoparticles on the slide can’t really be “seen” in any detail, Geitner explained.

“It is sort of like looking at the stars,” Geitner said. “You can’t tell what is a big star and what is a small star because they are so far away, you just get that point of light.”

But the image still contains loads of information, Geitner added, because each particle scatters a different color of light depending on its size and shape: particles on their own shine a cool blue, while particles that have joined together in clusters appear green, orange or red.

During the week, Harris and Turner saw a number of other techniques for studying nanoparticles, including scanning electron microscopes and molecular dynamics simulations.

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An image from the Steep collection, which uses visual imagery to explore how humans interact with the increasingly abundant gold nanoparticles in our environment. Credit: Raewyn Turner and Brian Harris.

“What we have found really, really interesting is that the nanoparticles have different properties,” Turner said. “Each type of nanoparticle is different to each other one, and it also depends on which environment you put them into, just like how a human will behave in different environments in different ways.”

Geitner says the experience has been illuminating for him, too. “I have never in my life thought of nanoparticles from this perspective before,” Geitner said. “A lot of their questions are about really, what is the difference when you get down to atoms, molecules, nanoparticles? They are all really, really small, but what does small mean?”

Kara J. Manke, PhD

Post by Kara Manke

Starting Your Own Business in Social Entrepreneurship? Lessons from Four Founders

Interested in starting your own jazz festival? Or creating hydrogen-rich water to boost your circulation and improve muscle recovery?

These are the accomplishments of Cicely Mitchell and Gail Levy, who were among four inspiring leaders at the evening panel discussion in the Fuqua School of Business this past Wednesday. Excited students and faculty gathered in the Kirby Reading room to learn about the leaders’ unique perspectives as founders of non-profit and for-profit solutions to various social impact and sustainability issues.

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Students and faculty gathered for dinner and networking before the panel discussion.

Organized by the Duke Innovation & Entrepreneurship Initiative and the Center for the Advancement of Social Entrepreneurship (CASE), the panel served to enlighten the audience about the challenges the women have faced and the lessons they learned in starting and scaling their social ventures. Panel moderator Erin Worsham, the Executive Director of CASE, opened the discussion with a few statistics.

In the non-profit sector, women make up 75% of the workforce, but in leadership positions, this ratio drops to 45%. As of 2013 in the for-profit sector, only 2.7% of venture capital investments went to fund companies with a female CEO. While black women own 1.5 million businesses in the U.S., they receive only 0.2% of venture funding. Undoubtedly, Worsham concluded, there is a lot of work to do in terms of women getting funded and represented as leaders.

Erin Worsham opened up the panel with statistics about women in the workforce. Worsham is the Executive Director of the award-winning CASE based at Duke University’s Fuqua School of Business

To commence the discussion, Worsham asked the panelists to speak about the gender discrimination they faced while starting their own companies. Gail Levy, founder of H Factor Water, a health-focused company producing hydrogen-infused water in environmentally friendly packaging, answered with a time she was challenged to a drinking match in order to close a deal. “The lesson I learned is to not go and drink your way into making a deal,” Levy joked. “But more importantly, you need to have grit and tenacity. Let our presence be known, because eventually we will be heard.”

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Gail Levy was the founder of the White House Millennium Green Committee under the Clinton Administration in 1999. She is passionate about advocating for women worldwide and is also the founder of H Factor Water.

Founder of The Art of Cool, a Durham nonprofit promoting music education to Durham-area youth, Cecily Mitchell remarked that she would be charged significantly more money than a male counterpart to work with the same artist.

Cicely Mitchell is co-founder of The Art of Cool, a Durham nonprofit promoting music education to Durham-area youth

Cicely Mitchell is co-founder of The Art of Cool, a Durham nonprofit promoting music education to Durham-area youth

Rebecca Ballard, lawyer and founder of Maven Women, a sustainability-focused fashion company dedicated to making professional wear for women, noted that “we live in a visual world, but we need to start looking at a person’s character rather than solely focusing on how they look.” Based on her experience with her medical real estate development company ACCESS Medical Development, angel investor Stephanie Wilson expanded on the comment, adding that the best thing to do about the prejudice against women is to know that it’s there and fight for it.

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Rebecca Ballard told the audience, “The most challenging thing about being a working woman is that appearance is considered ‘relevant.’” She started her career as a public interest lawyer and was previously the Executive Director of Social Impact 360.

I asked the founders to share their experiences in building a successful customer base. Wilson noted that to institute her company, she “determined who was the top real estate agent in our area and sought them out. I discussed my idea with them and asked for their advice on segueing into the market.” She suggested sending handwritten thank you notes to build relationships with your customers.

Stephanie Wilson founded ACCESS Medical Development and is also the co-founder of MillennialsMovingMillions.org.

Stephanie Wilson founded ACCESS Medical Development and is also the co-founder of MillennialsMovingMillions.org.

Mitchell added that The Art of Cool held the first few concerts for relatives and friends, and later partnered up with other small entrepreneurs. “Make sure what you do connects with people enough that they want to go and tell other people about what you’re doing,” she advised.

Cecily Mitchell talked about her experience with The Art of Cool. She handles the booking, contracts, networking, pitching for sponsorships and assisting in writing grants for the company.

Maven Woman founder Rebecca Ballard commented on the importance getting support from women in other sustainable industries, since “you are all driven by the same mission in the social entrepreneurship space.”

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Rebecca Ballard is the founder of Maven Women, a sustainability-focused fashion company dedicated on making professional wear for women.

Worsham’s final question for the panel asked for any last pieces of advice. Ballard concluded the conversation with a reason why she started her company: “Social entrepreneurship exists because the status quo is not okay. There are externalities happening and people being treated badly; the status quo doesn’t have to be the way it is.”

From left to right:

Posing with the panelists! From left to right: Anika Radiya-Dixit (author), Gail Levy, Cecily Mitchell, Rebecca Ballard, and Stephanie Wilson.

By Anika Radiya-Dixit

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Girls Get An Eye-Opening Introduction to Photonics

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Demonstration of the Relationship between Solar Power and Hydrogen Fuel. Image courtesy of DukeEngineering.

Last week I attended the “Exploring Light Technologies” open house hosted by the Fitzpatrick Institute for Photonics, held to honor International “Introduce a Girl to Photonics” Week. It was amazing!

I was particularly enraptured by a MEDx Wireless Technology presentation and demonstration titled “Using Light to Monitor Health and View Health Information.” There were three “stations” with a presenter at each station.

At the first station, the presenter, Julie, discussed how wearable technologies are used in optical heart rate monitoring. For example, a finger pulse oximeter uses light to measure blood oxygen levels and heart rates, and fitness trackers typically contain LED lights in the band. These lights shine into the skin and the devices use algorithms to read the amount of light scattered by the flow of blood, thus measuring heart rate.

At the second station, the presenter, Jackie, spoke about head-mounted displays and their uses. The Google Glass helped inspire the creation of the Microsoft Hololens, a new holographic piece of technology resembling a hybrid of laboratory goggles and a helmet. According to Jackie, the Microsoft Hololens “uses light to generate 3D objects we can see in our environment.”

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Using the Microsoft Hololens. Image courtesy of DukeEngineering.

After viewing a video on how the holographic technology worked, I put on the Microsoft Hololens at the demonstration station. The team had set up 3D images of a cat, a dog and a chimpanzee. “Focus the white point of light on the object and make an L-shape with your fingers,” directed Eric, the overseer. “Snap to make the objects move.” With the heavy Hololens pressing down on my nose, I did as he directed. Moving my head moved the point of light. Using either hand to snap made the dog bark, the cat meow and lick its paws, and the chimpanzee eat. Even more interesting was the fact that I could move around the animals and see every angle, even when the objects were in motion. Throughout the day, I saw visitors of all ages with big smiles on their faces, patting and “snapping” at the air.

Applications of the Microsoft Hololens are promising. In the medical field, they can be used to display patient health information or electronic health records in one’s line of sight. In health education, students can view displays of interactive 3D anatomical animations. Architects can use the Hololens to explore buildings. “Imagine learning about Rome in the classroom. Suddenly, you can actually be in Rome, see the architecture, and explore the streets,” Jackie said. “[The Microsoft Hololens] deepens the educational experience.”

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Tour of the Facilities. Image courtesy of DukeEngineering.

Throughout the day, I oo-ed and aw-ed at the three floors-worth of research presentations lining the walls. Interesting questions were posed on easy-to-comprehend posters, even for a non-engineer such as myself. The event organizers truly did make sure that all visitors would find at least one presentation to pique their interest. There were photonic displays and demonstrations with topics ranging from art to medicine to photography to energy conservation…you get my point.

Truly an eye-opening experience!

Post by Meg Shiehmeg_shieh_100hed

Meet the Newbie: Maya Iskandarani

Hello!

My name is Maya Iskandarani, and I’m a freshman at Duke from Miami, Florida—meaning I’ll probably be in trouble once the temperature in Durham drops below 50°.

Messing around with an electric circuit at the Center for Sustainable Development (CSD) at the Island School. Source: Island School Communications Team

Messing around with an electric circuit in the Center for Sustainable Development (CSD) at The Island School. Source: The Island School Communications Team.

Though I might be poorly prepared for “real” seasons, I’m no less excited to start my adventure at Duke. For now, my academic interests lie in Biology (particularly Genetics and Marine Science), Earth and Ocean Sciences, Neuroscience, Spanish, Arabic, and French. I’m also in the Genetics and Genomics cluster of the Duke Focus Program. As you can see, I have some intense self-reflection to do before I declare a major.

I’m a walk-on to the Duke Women’s Rowing team, and feel very lucky to start fresh in an awesome sport with fantastic coaches and teammates. I also participated in Project WILD this summer, camping for two weeks in Pisgah National Forest without much prior camping, hiking, or backpacking experience. Otherwise, I’ve fought my instinct to jump into a million cool extracurricular clubs and programs, so I can get a handle on this “college” thing before I bite off more than I can chew.

In high school, I was an editor for the school newsmagazine (s/o highlights), president of the International Baccalaureate Honor Society (IBHS), vice president of the environmental club, Gables Earth, and a scooper at Whip ‘n Dip, an ice cream shop down the street from my house. I trained with the club swim team Miami Swimming for six years, and competed for my high school swim team for four.

My first taste of research was volunteering with Dr. Claire Paris of the University of Miami in my junior year of high school. I spent a few weeks helping then-PhD-candidate Dr. Erica Staaterman (a Duke alumna!) complete her dissertation on the relationship between marine soundscapes and biodiversity. My role was small, but fascinating: I used a computer program to manually filter hydrophone recordings from coral reefs in the Florida Keys for boat noise.

Preparing for a boat dive off of Cape Eleuthera, with underwater slate in hand to take notes while observing the coral reef.

Preparing for a boat dive off of Cape Eleuthera, with underwater slate in hand to take notes on coral reef life. Source: The Island School Communications Team.

My experience in Dr. Paris’s lab spurred me to further explore marine science, so I applied to attend The Island School over the summer entering my senior year. I spent a month in the blazing heat of the Bahamas, freediving through the same crystal-clear waters in the mornings that I returned to study on SCUBA in the afternoons. Although I’m not quite set on Marine Science as a course of study at Duke, I absolutely intend to spend a semester or two at the Duke Marine Lab to figure it out.

My curiosity in nearly all academic subjects pulls me in a hundred different directions, a few of which I hope to follow through with as part of the Duke Research Blog team. I can’t wait to meet researchers who are passionate about their work, and, perhaps, discover a research passion of my own.

Meet the New Blogger: Shanen Ganapathee

Hi y’all! My name is Shanen and I am from the deep, deep South… of the globe. I was born and raised in Mauritius, a small island off the coast of Madagascar, once home to the now-extinct Dodo bird.

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Shanen Ganapathee is a senior who wishes to be ‘a historian of the brain’

The reason I’m at Duke has to do with a desire to do what I love most — exploring art, science and their intersection. You will often find me writing prose; inspired by lessons in neuroanatomy and casting a DNA strand as the main character in my short story.

I’m excited about Africa, and the future of higher education and research on the continent. I believe in ideas, especially when they are big and bold. I’m a dreamer, an idealist but some might call me naive. I am deeply passionate about research but above all how it is made accessible to a wide audience.

I am currently a senior pursuing a Program II in Human Cognitive Evolution, a major I designed in my sophomore year with the help of my advisor, Dr. Leonard White, whom I had to luck to meet through the Neurohumanities Program in Paris.

This semester, I am working on a thesis project under the guidance of Dr. Greg Wray, inspired by an independent study I did under Dr. Steven Churchill, where we examined the difference in early human and Neandertal cognition and behavior. I am interested in using ancient DNA genomics to answer the age-old question: what makes us human? My claim is that the advent of artistic ventures truly shaped the beginning of behavioral modernity. In a sense, I want to be a historian of the brain.

My first exposure to the world of genomics was through the FOCUS program — Genome in our Lives — my freshman fall. Ever since, I have been fascinated by what the human genome can teach us. It is a window into our collective pasts as much as it informs us about our present and future. I am particularly intrigued by how the forces of evolution have shaped us to become the species we are.

I am excited about joining the Duke Research blog and sharing some great science with you all.